Microcarrier Planner
1Cell type
Microcarrier ?
Specific area (cm²/g)
Bead d50 (µm)
Bead density (g/mL)
Beads per g (×106)
Carrier load (g/L) ?
Working volume (L)
2Seeding basis
Seeding value ?
Attachment eff. (%)
Inoculum stock density (×106 cells/mL)
3Confluent density (×104 cells/cm²)
Doubling time (h)
Harvest eff. (%)
4Impeller / vessel geometry
Impeller diameter (cm) ?
Power number Np
Zwietering S ?
Impellers (count)
Set agitation (rpm) ?
0
cm²
Total growth surface
cm²/mL
Carriers
T-175 equivalent
Swollen vol %

2Seeding plan

Cells per carrier
Cells per cm²
Cells per mL
Total cells to inoculate
Inoculum volume from stock
Attached after efficiency
Carriers receiving zero cells ?

3Expansion & yield projection

Harvested cells
Expansion factor
Days to confluence

4Agitation window

Njs (rpm)
Shear limit (rpm)
λ at Njs (µm)
P/V (W/m³)

The green band is the workable window: fast enough to suspend the carriers, slow enough that the Kolmogorov microscale λ stays above half the bead diameter. Run at the bottom of it. Rafiq and colleagues found that operating at the minimum speed required to just suspend the carriers is what preserves the cells' critical quality attributes.

5Harvest plan

Detachment agitation (5× culture speed)
λ during the burst
Detached cell diameter assumed15 µm
Detachment time~7 min
Expected harvest

Troubleshoot

Pick a symptom above.

Related Articles

Microcarrier Cell Culture Guide
Carrier types, attachment, bead-to-bead transfer and harvest
Cell Seeding Density Chart
Reference densities by cell type and vessel
Bioreactor Impeller Selection
Power numbers, pumping direction and shear
Exosome Manufacturing Scale-Up
MSC-derived vesicle production at scale

Frequently Asked Questions

How do you calculate microcarrier surface area?

Multiply the carrier's specific surface area (cm² per gram dry weight) by the carrier mass, which is the load in g/L times the working volume in litres. Cytodex 1 is 4400 cm²/g and Cytodex 3 is 2700 cm²/g. At a typical 3 g/L load that gives 13.2 and 8.1 cm²/mL of volumetric growth area. A 2.5 L culture of Cytodex 1 at 3 g/L provides 33 000 cm², about 190 confluent T-175 flasks worth of surface.

What agitation speed should I use for microcarrier culture?

Run at the minimum speed that just suspends the carriers, Njs. The Zwietering correlation estimates it, but the coefficient S is geometry-specific: published values are 4.8 for a 125 mL Bellco spinner and 9.2 for a DASbox with dual marine impellers. Calibrate S once by observing the speed at which your own carriers just clear the vessel base, then the correlation will scale correctly as you change load, bead type or volume. Operating above Njs adds shear without adding suspension.

How many cells should I seed per microcarrier?

Typically 3 to 6 cells per carrier for mesenchymal stem cells and 5 to 10 for continuous lines such as Vero or HEK293. The consequence worth watching is Poisson statistics. At a mean of 3 cells per carrier about 5% of beads receive none at all; at a mean of 5 that falls to roughly 0.7%. Empty carriers only become productive via bead-to-bead transfer, which published work describes as a nontrivial problem, so a low seeding ratio quietly costs you usable surface.

Why do cells detach from microcarriers at high agitation?

Damage is governed by the Kolmogorov microscale λ, the size of the smallest turbulent eddies. Once λ drops below about one half to two thirds of the bead diameter, eddies act across the carrier and strip attached cells. Because λ shrinks as agitation rises, every rpm past Njs moves you toward that limit. In one published HEK293T study on Cytodex 3, cells stayed attached at 250 rpm and were visibly sheared off at 300 rpm, which is where λ crosses half the bead diameter for that geometry.

How do you harvest cells from microcarriers?

Two steps: detach the cells, then separate them from the beads. A published scalable method raises agitation roughly fivefold above the culture speed with a dissociation reagent present, detaching cells in about seven minutes, then uses filtration to separate the single-cell suspension from the carriers. Harvest efficiency exceeded 95% and the cells stayed viable with their quality attributes intact, because a detached 15 µm cell is far below the Kolmogorov scale even at the elevated speed.

How many T-flasks does a microcarrier bioreactor replace?

Divide the total carrier surface area by the flask area, 175 cm² for a T-175. Published work reported a single 5 L stirred-tank holding 2.5 L of culture producing as many hMSCs as about 65 fully confluent T-175 flasks in a robotic scale-out system. The ratio improves quickly with carrier load, because surface area scales linearly with g/L while the vessel footprint does not change.

Should I sparge a microcarrier culture?

At the cell densities and scales typical of current stem-cell microcarrier work, surface aeration through the medium is usually sufficient and sparging is avoided. Bubble rupture is more damaging than bulk shear, and the usual mitigation, Pluronic F-68, is harder to justify in a cell therapy process where the cell itself is the product rather than a secreted molecule. Raise carrier load and volume before you reach for a sparger, and if you must sparge, add it as a separate low-flow duty rather than increasing total gas throughput.

Further reading